Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC131009.4-201ENST00000624048 1740 ntBASIC16.27■□□□□ 0.19
SPHK1Q9NYA1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SPHK1Q9NYA1 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPHK1Q9NYA1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SPHK1Q9NYA1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 UPF3AP3-201ENST00000420996 769 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 ALG1L5P-201ENST00000482043 771 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AL031432.2-201ENST00000566714 459 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AL928711.1-201ENST00000570165 459 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 MIR4492-201ENST00000581627 80 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AL078644.1-201ENST00000609881 752 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AL645728.2-201ENST00000641974 660 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AC022211.2-201ENST00000585075 2527 ntBASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.26■□□□□ 0.19
SPHK1Q9NYA1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 DNAJB3-201ENST00000446806 729 ntBASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SPHK1Q9NYA1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 HCG4-201ENST00000418983 998 ntBASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AP002472.1-201ENST00000577490 586 ntBASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AC068137.2-201ENST00000605408 478 ntBASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 AC105020.1-201ENST00000435356 2205 ntBASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SPHK1Q9NYA1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms