Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 AC104692.2-201ENST00000603054 253 ntBASIC19.92■□□□□ 0.78
RNF216Q9NWF9 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 OR4G3P-201ENST00000633500 913 ntBASIC19.92■□□□□ 0.78
RNF216Q9NWF9 AC083906.6-201ENST00000641366 219 ntBASIC19.92■□□□□ 0.78
RNF216Q9NWF9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF216Q9NWF9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 AL357033.4-201ENST00000617703 1807 ntBASIC19.91■□□□□ 0.78
RNF216Q9NWF9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 GTF2IP9-201ENST00000502460 301 ntBASIC19.91■□□□□ 0.78
RNF216Q9NWF9 AC008494.2-201ENST00000514544 370 ntBASIC19.91■□□□□ 0.78
RNF216Q9NWF9 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 AC022417.1-201ENST00000624768 1303 ntBASIC19.91■□□□□ 0.78
RNF216Q9NWF9 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 NSUN5P1-202ENST00000421140 1535 ntBASIC19.91■□□□□ 0.78
RNF216Q9NWF9 NSUN5P2-203ENST00000457352 1529 ntBASIC19.91■□□□□ 0.78
RNF216Q9NWF9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF216Q9NWF9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 INE2-201ENST00000630399 1874 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 MIR149-201ENST00000384879 89 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 RNU6-233P-201ENST00000410845 141 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SAPCD2P3-201ENST00000455031 850 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 AC096751.2-201ENST00000507483 792 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 NRON-201ENST00000517270 370 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 AC099518.2-201ENST00000565802 704 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 AC025263.3-201ENST00000622965 1396 ntBASIC19.9■□□□□ 0.78
RNF216Q9NWF9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF216Q9NWF9 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms