Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.81■□□□□ 0.12
RLIMQ9NVW2 AP001269.4-201ENST00000609611 512 ntBASIC15.81■□□□□ 0.12
RLIMQ9NVW2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RLIMQ9NVW2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 AC079776.2-201ENST00000641154 1609 ntBASIC15.8■□□□□ 0.12
RLIMQ9NVW2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 AP005117.1-201ENST00000584346 1413 ntBASIC15.8■□□□□ 0.12
RLIMQ9NVW2 SIGLEC16-201ENST00000599858 1437 ntBASIC15.8■□□□□ 0.12
RLIMQ9NVW2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RLIMQ9NVW2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 AC007950.2-201ENST00000615045 2347 ntBASIC15.79■□□□□ 0.12
RLIMQ9NVW2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 AL732292.2-201ENST00000609649 430 ntBASIC15.79■□□□□ 0.12
RLIMQ9NVW2 AC073592.4-201ENST00000623827 446 ntBASIC15.79■□□□□ 0.12
RLIMQ9NVW2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RLIMQ9NVW2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 HLA-A-202ENST00000376806 1854 ntBASIC15.78■□□□□ 0.12
RLIMQ9NVW2 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RLIMQ9NVW2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms