Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CISHQ9NSE2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CISHQ9NSE2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CISHQ9NSE2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CISHQ9NSE2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.02■□□□□ 0.47
CISHQ9NSE2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CISHQ9NSE2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.02■□□□□ 0.47
CISHQ9NSE2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 KRT18P2-201ENST00000447938 1258 ntBASIC18.01■□□□□ 0.47
CISHQ9NSE2 AC096734.2-201ENST00000562054 433 ntBASIC18.01■□□□□ 0.47
CISHQ9NSE2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.01■□□□□ 0.47
CISHQ9NSE2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CISHQ9NSE2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18■□□□□ 0.47
CISHQ9NSE2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18■□□□□ 0.47
CISHQ9NSE2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18■□□□□ 0.47
CISHQ9NSE2 HS6ST1P1-201ENST00000481504 1234 ntBASIC18■□□□□ 0.47
CISHQ9NSE2 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 CD63-210ENST00000550776 870 ntTSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18■□□□□ 0.47
CISHQ9NSE2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18■□□□□ 0.47
CISHQ9NSE2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CISHQ9NSE2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CISHQ9NSE2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 RHOQP3-201ENST00000437982 621 ntBASIC17.99■□□□□ 0.47
CISHQ9NSE2 AL513480.1-201ENST00000451731 511 ntBASIC17.99■□□□□ 0.47
CISHQ9NSE2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.99■□□□□ 0.47
CISHQ9NSE2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CISHQ9NSE2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms