Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 LINC00895-201ENST00000629028 1637 ntBASIC17.18■□□□□ 0.34
SPHK2Q9NRA0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SPHK2Q9NRA0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 SLC25A39P2-201ENST00000537614 270 ntBASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AP000842.3-202ENST00000569238 1080 ntBASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.17■□□□□ 0.34
SPHK2Q9NRA0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 MIR346-201ENST00000362234 95 ntBASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 SPCS2P1-201ENST00000561636 679 ntBASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 AC026150.2-201ENST00000564693 1156 ntBASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 AC005498.2-205ENST00000593218 784 ntBASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 TUBB3P1-201ENST00000405796 1332 ntBASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 AC141586.5-201ENST00000624546 2050 ntBASIC17.16■□□□□ 0.34
SPHK2Q9NRA0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 AC006277.1-201ENST00000624348 1610 ntBASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 AC092068.3-201ENST00000587894 2016 ntBASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 SPDYE14P-201ENST00000442619 822 ntBASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 MIR3197-201ENST00000582241 73 ntBASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 AC092364.2-202ENST00000597012 1073 ntBASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.15■□□□□ 0.34
SPHK2Q9NRA0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms