Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM7Q9NR12 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 LETM1P2-201ENST00000597330 2178 ntBASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 HMGA1P7-201ENST00000406908 502 ntBASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 AC241585.1-201ENST00000433527 519 ntBASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM7Q9NR12 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 ALG1L8P-201ENST00000533887 760 ntBASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 AL009183.1-201ENST00000603760 355 ntBASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM7Q9NR12 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM7Q9NR12 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 SLC22A20-204ENST00000530038 1673 ntBASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 KRT8P49-201ENST00000604166 1432 ntBASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM7Q9NR12 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms