Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 LAGE3P1-201ENST00000425356 484 ntBASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 AC139887.3-201ENST00000568585 713 ntBASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 AL589182.2-201ENST00000619332 1049 ntBASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NECTIN3Q9NQS3 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 RPS2P28-201ENST00000314255 741 ntBASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 LINC00982-205ENST00000420957 435 ntBASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.27■□□□□ 0.2
NECTIN3Q9NQS3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 NCF1C-201ENST00000438382 1427 ntBASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.27■□□□□ 0.19
NECTIN3Q9NQS3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AC243591.1-201ENST00000452967 1364 ntBASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AC004706.3-202ENST00000621574 984 ntBASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AC008735.5-201ENST00000623544 497 ntBASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NECTIN3Q9NQS3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms