Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 GGTLC5P-201ENST00000617623 998 ntBASIC14.49□□□□□ -0.09
GCM1Q9NP62 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AL645608.8-201ENST00000606034 2086 ntBASIC14.49□□□□□ -0.09
GCM1Q9NP62 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
GCM1Q9NP62 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GCM1Q9NP62 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AC145285.3-201ENST00000564603 959 ntBASIC14.48□□□□□ -0.09
GCM1Q9NP62 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 Z83851.2-201ENST00000609564 659 ntBASIC14.48□□□□□ -0.09
GCM1Q9NP62 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AF228730.7-201ENST00000641842 219 ntBASIC14.48□□□□□ -0.09
GCM1Q9NP62 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.48□□□□□ -0.09
GCM1Q9NP62 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
GCM1Q9NP62 AC104109.2-201ENST00000602919 1418 ntBASIC14.48□□□□□ -0.09
GCM1Q9NP62 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
GCM1Q9NP62 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 AC108860.2-201ENST00000562760 2183 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 LINC02012-201ENST00000608206 1725 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 RHBDF1P1-201ENST00000427504 1941 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 AL022342.1-201ENST00000400363 863 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 AC009947.1-201ENST00000444350 727 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PAWRP1-201ENST00000451083 565 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 AC108751.1-201ENST00000490852 363 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 SLC25A1P1-201ENST00000528351 927 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.47□□□□□ -0.09
GCM1Q9NP62 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GCM1Q9NP62 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GCM1Q9NP62 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms