Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 EMBP1-201ENST00000458200 901 ntBASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 AC009336.1-201ENST00000608941 1553 ntBASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLK4Q9HAZ1 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 AL022326.1-202ENST00000641533 845 ntBASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 AC068418.2-201ENST00000577309 3703 ntBASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLK4Q9HAZ1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLK4Q9HAZ1 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 AC060834.1-201ENST00000443027 2032 ntBASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CLK4Q9HAZ1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLK4Q9HAZ1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLK4Q9HAZ1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.51■□□□□ 0.23
CLK4Q9HAZ1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.51■□□□□ 0.23
CLK4Q9HAZ1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms