Protein–RNA interactions for Protein: Q9H467

CUEDC2, CUE domain-containing protein 2, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2Q9H467 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC2Q9H467 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CUEDC2Q9H467 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CUEDC2Q9H467 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 AC012640.2-201ENST00000561606 901 ntBASIC18.83■□□□□ 0.6
CUEDC2Q9H467 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 FAM215A-202ENST00000632077 792 ntBASIC18.83■□□□□ 0.6
CUEDC2Q9H467 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CUEDC2Q9H467 OR6D1P-203ENST00000641209 4860 ntBASIC18.83■□□□□ 0.6
CUEDC2Q9H467 KRT8P39-201ENST00000396270 1433 ntBASIC18.83■□□□□ 0.6
CUEDC2Q9H467 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 SLC22A20-204ENST00000530038 1673 ntBASIC18.82■□□□□ 0.6
CUEDC2Q9H467 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 HCG4-201ENST00000418983 998 ntBASIC18.82■□□□□ 0.6
CUEDC2Q9H467 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 AL031008.1-201ENST00000619963 541 ntBASIC18.82■□□□□ 0.6
CUEDC2Q9H467 AP001350.2-201ENST00000625104 1094 ntBASIC18.82■□□□□ 0.6
CUEDC2Q9H467 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 AP002414.3-201ENST00000589352 1468 ntBASIC18.82■□□□□ 0.6
CUEDC2Q9H467 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CUEDC2Q9H467 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 PCDHB19P-201ENST00000570871 2371 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 MRPL20P1-201ENST00000400819 433 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 AC087641.1-201ENST00000557561 1021 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 AC104692.2-201ENST00000603054 253 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 AL773604.1-201ENST00000617417 272 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 AC148477.8-201ENST00000624298 468 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 UBALD1-205ENST00000590891 2641 ntBASIC18.81■□□□□ 0.6
CUEDC2Q9H467 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CUEDC2Q9H467 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms