Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SEPT9-235ENST00000591020 582 ntTSL 412.73□□□□□ -0.371e-6■■□□□ 12.7
XRN2Q9H0D6 FTH1-207ENST00000532601 742 ntTSL 3 BASIC9.69□□□□□ -0.862e-6■■□□□ 12.7
XRN2Q9H0D6 SRRM2-225ENST00000576076 914 nt18.88■□□□□ 0.611e-28■■□□□ 12.7
XRN2Q9H0D6 SRRM2-212ENST00000572952 1118 ntTSL 216.54■□□□□ 0.241e-28■■□□□ 12.7
XRN2Q9H0D6 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.46■□□□□ 0.231e-28■■□□□ 12.7
XRN2Q9H0D6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.215e-6■■□□□ 12.7
XRN2Q9H0D6 KAT2A-202ENST00000465682 2990 ntTSL 512.76□□□□□ -0.375e-6■■□□□ 12.7
XRN2Q9H0D6 SRRM2-209ENST00000572278 711 ntTSL 210.28□□□□□ -0.761e-28■■□□□ 12.7
XRN2Q9H0D6 SRRM2-215ENST00000573498 994 ntTSL 38.09□□□□□ -1.111e-28■■□□□ 12.7
XRN2Q9H0D6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.75■□□□□ 0.592e-9■■□□□ 12.7
XRN2Q9H0D6 MAT2A-205ENST00000481412 1438 ntTSL 1 (best)13.52□□□□□ -0.252e-9■■□□□ 12.7
XRN2Q9H0D6 SLC43A1-202ENST00000524995 953 ntTSL 323.66■■□□□ 1.383e-6■■□□□ 12.7
XRN2Q9H0D6 KLF6-201ENST00000173785 925 ntTSL 215.43■□□□□ 0.061e-6■■□□□ 12.7
XRN2Q9H0D6 KLF6-206ENST00000497571 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.21e-6■■□□□ 12.7
XRN2Q9H0D6 KLF6-207ENST00000542957 4537 ntTSL 5 BASIC11.76□□□□□ -0.531e-6■■□□□ 12.7
XRN2Q9H0D6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.063e-6■■□□□ 12.7
XRN2Q9H0D6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.22e-8■■□□□ 12.7
XRN2Q9H0D6 PTPN23-206ENST00000602307 5119 ntTSL 212.13□□□□□ -0.472e-8■■□□□ 12.7
XRN2Q9H0D6 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.969e-8■■□□□ 12.7
XRN2Q9H0D6 HSBP1L1-203ENST00000589516 800 ntTSL 324.47■■□□□ 1.519e-8■■□□□ 12.7
XRN2Q9H0D6 HSBP1L1-205ENST00000592352 564 ntTSL 223.8■■□□□ 1.49e-8■■□□□ 12.7
XRN2Q9H0D6 TAF15-210ENST00000604694 891 ntTSL 520.6■□□□□ 0.895e-10■■□□□ 12.7
XRN2Q9H0D6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.47■□□□□ 0.553e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.53e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.37■□□□□ 0.373e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.363e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.133e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.113e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-204ENST00000441149 3286 ntTSL 1 (best)14.97□□□□□ -0.013e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.053e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-227ENST00000637999 1429 ntTSL 514.37□□□□□ -0.113e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.233e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.543e-7■■□□□ 12.7
XRN2Q9H0D6 DNM1-207ENST00000482638 672 ntTSL 510.84□□□□□ -0.673e-7■■□□□ 12.7
XRN2Q9H0D6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.79■■□□□ 1.242e-15■■□□□ 12.7
XRN2Q9H0D6 EPS8L2-220ENST00000531393 2304 ntTSL 1 (best)19.76■□□□□ 0.752e-15■■□□□ 12.7
XRN2Q9H0D6 F7-205ENST00000479674 767 ntTSL 527.49■■□□□ 1.995e-8■■□□□ 12.7
XRN2Q9H0D6 SLC16A3-216ENST00000583025 955 ntTSL 222.92■■□□□ 1.267e-10■■□□□ 12.7
XRN2Q9H0D6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.93■□□□□ 0.622e-6■■□□□ 12.7
XRN2Q9H0D6 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.62e-6■■□□□ 12.7
XRN2Q9H0D6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.223e-6■■□□□ 12.6
XRN2Q9H0D6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.71■■□□□ 1.074e-7■■□□□ 12.6
XRN2Q9H0D6 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.994e-7■■□□□ 12.6
XRN2Q9H0D6 HIRA-203ENST00000452818 453 ntTSL 513.7□□□□□ -0.224e-7■■□□□ 12.6
XRN2Q9H0D6 C22orf39-204ENST00000509549 2979 ntTSL 213.07□□□□□ -0.324e-7■■□□□ 12.6
XRN2Q9H0D6 NOTUM-202ENST00000425009 996 ntTSL 328.97■■■□□ 2.232e-16■■□□□ 12.6
XRN2Q9H0D6 BCAR1-217ENST00000566465 547 ntTSL 418.17■□□□□ 0.52e-6■■□□□ 12.6
XRN2Q9H0D6 BCAR1-214ENST00000563700 576 ntTSL 416.79■□□□□ 0.282e-6■■□□□ 12.6
XRN2Q9H0D6 BCAR1-219ENST00000567215 581 ntTSL 416.35■□□□□ 0.212e-6■■□□□ 12.6
XRN2Q9H0D6 AC009078.3-201ENST00000624205 4084 ntBASIC12.1□□□□□ -0.472e-6■■□□□ 12.6
XRN2Q9H0D6 ST7-215ENST00000438863 1005 ntTSL 532.43■■■□□ 2.786e-7■■□□□ 12.6
XRN2Q9H0D6 EIF2AK2-202ENST00000390013 564 ntTSL 431.29■■■□□ 2.66e-7■■□□□ 12.6
XRN2Q9H0D6 PRKRIP1-205ENST00000477886 986 ntTSL 1 (best)28.86■■■□□ 2.218e-12■■□□□ 12.6
XRN2Q9H0D6 IL4R-206ENST00000562142 518 ntTSL 328.81■■■□□ 2.26e-7■■□□□ 12.6
XRN2Q9H0D6 PRKRIP1-204ENST00000469763 1642 ntTSL 527.34■■□□□ 1.978e-12■■□□□ 12.6
XRN2Q9H0D6 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.966e-7■■□□□ 12.6
XRN2Q9H0D6 ST7-205ENST00000393446 2114 ntTSL 5 BASIC27.08■■□□□ 1.936e-7■■□□□ 12.6
XRN2Q9H0D6 PRKRIP1-207ENST00000482549 1625 ntTSL 1 (best)27.06■■□□□ 1.928e-12■■□□□ 12.6
XRN2Q9H0D6 SUN2-208ENST00000438058 1012 ntTSL 327.06■■□□□ 1.926e-7■■□□□ 12.6
XRN2Q9H0D6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.99■■□□□ 1.916e-7■■□□□ 12.6
XRN2Q9H0D6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.99■■□□□ 1.916e-7■■□□□ 12.6
XRN2Q9H0D6 CRLF1-203ENST00000594325 1020 ntTSL 326.91■■□□□ 1.96e-7■■□□□ 12.6
XRN2Q9H0D6 F2-202ENST00000442468 1031 ntTSL 325.02■■□□□ 1.66e-7■■□□□ 12.6
XRN2Q9H0D6 HSF1-205ENST00000528842 935 ntTSL 223.46■■□□□ 1.356e-7■■□□□ 12.6
XRN2Q9H0D6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.45■■□□□ 1.346e-7■■□□□ 12.6
XRN2Q9H0D6 MARS-217ENST00000549074 532 ntTSL 423.01■■□□□ 1.276e-7■■□□□ 12.6
XRN2Q9H0D6 DDX54-208ENST00000551344 872 ntTSL 522.44■■□□□ 1.186e-7■■□□□ 12.6
XRN2Q9H0D6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.176e-7■■□□□ 12.6
XRN2Q9H0D6 PHF20-207ENST00000461122 919 ntTSL 322.23■■□□□ 1.152e-11■■□□□ 12.6
XRN2Q9H0D6 PPAN-207ENST00000468881 627 ntTSL 221.83■■□□□ 1.098e-12■■□□□ 12.6
XRN2Q9H0D6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.48■■□□□ 1.038e-12■■□□□ 12.6
XRN2Q9H0D6 OBSL1-205ENST00000456147 1571 ntTSL 221.33■■□□□ 1.016e-7■■□□□ 12.6
XRN2Q9H0D6 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.2■□□□□ 0.986e-7■■□□□ 12.6
XRN2Q9H0D6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.04■□□□□ 0.966e-7■■□□□ 12.6
XRN2Q9H0D6 NFE2L1-220ENST00000584634 588 ntTSL 421■□□□□ 0.956e-7■■□□□ 12.6
XRN2Q9H0D6 SUN2-212ENST00000456894 1074 ntTSL 520.95■□□□□ 0.946e-7■■□□□ 12.6
XRN2Q9H0D6 HSF1-214ENST00000614796 1724 ntTSL 520.88■□□□□ 0.936e-7■■□□□ 12.6
XRN2Q9H0D6 NFE2L1-205ENST00000577411 562 ntTSL 520.85■□□□□ 0.936e-7■■□□□ 12.6
XRN2Q9H0D6 NFE2L1-211ENST00000580050 476 ntTSL 420.85■□□□□ 0.936e-7■■□□□ 12.6
XRN2Q9H0D6 SUN2-205ENST00000420859 538 ntTSL 520.65■□□□□ 0.96e-7■■□□□ 12.6
XRN2Q9H0D6 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.54■□□□□ 0.888e-12■■□□□ 12.6
XRN2Q9H0D6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.858e-12■■□□□ 12.6
XRN2Q9H0D6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.21■□□□□ 0.836e-7■■□□□ 12.6
XRN2Q9H0D6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.758e-12■■□□□ 12.6
XRN2Q9H0D6 SUN2-207ENST00000433561 444 ntTSL 419.26■□□□□ 0.676e-7■■□□□ 12.6
XRN2Q9H0D6 ING5-212ENST00000493578 1136 ntTSL 319.26■□□□□ 0.676e-7■■□□□ 12.6
XRN2Q9H0D6 EIF2AK2-205ENST00000411537 623 ntTSL 519.24■□□□□ 0.676e-7■■□□□ 12.6
XRN2Q9H0D6 AKT2-232ENST00000578615 877 ntTSL 519.1■□□□□ 0.655e-6■■□□□ 12.6
XRN2Q9H0D6 IL4R-211ENST00000563926 594 ntTSL 419.06■□□□□ 0.646e-7■■□□□ 12.6
XRN2Q9H0D6 IL4R-204ENST00000561742 379 ntTSL 319.06■□□□□ 0.646e-7■■□□□ 12.6
XRN2Q9H0D6 VWCE-206ENST00000538438 1076 ntTSL 318.95■□□□□ 0.626e-7■■□□□ 12.6
XRN2Q9H0D6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.618e-12■■□□□ 12.6
XRN2Q9H0D6 OBSL1-215ENST00000604031 1774 ntTSL 218.76■□□□□ 0.596e-7■■□□□ 12.6
XRN2Q9H0D6 MARS-213ENST00000548674 749 ntTSL 518.68■□□□□ 0.586e-7■■□□□ 12.6
XRN2Q9H0D6 NFE2L1-217ENST00000583210 512 ntTSL 418.64■□□□□ 0.576e-7■■□□□ 12.6
XRN2Q9H0D6 SUN2-210ENST00000452294 621 ntTSL 418.51■□□□□ 0.556e-7■■□□□ 12.6
XRN2Q9H0D6 FGFR1-216ENST00000466021 823 ntTSL 218.36■□□□□ 0.538e-12■■□□□ 12.6
XRN2Q9H0D6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.478e-12■■□□□ 12.6
XRN2Q9H0D6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.46e-7■■□□□ 12.6
XRN2Q9H0D6 IRF3-211ENST00000596644 550 ntTSL 217.44■□□□□ 0.386e-7■■□□□ 12.6
Retrieved 100 of 21,068 protein–RNA pairs in 135.2 ms