Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF3BQ9BZI7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.22■□□□□ 0.83
UPF3BQ9BZI7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
UPF3BQ9BZI7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 AC008894.3-201ENST00000624324 3103 ntBASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 AC006449.5-201ENST00000610658 2098 ntBASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
UPF3BQ9BZI7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 LINC02199-201ENST00000506655 2702 ntBASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 ALOX12P2-203ENST00000570921 1945 ntBASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 RBM17P3-201ENST00000417687 1192 ntBASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 TSPY19P-201ENST00000418461 509 ntBASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 TSPY18P-201ENST00000441642 509 ntBASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 AL139288.1-201ENST00000623748 933 ntBASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
UPF3BQ9BZI7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 FGFR3P6-201ENST00000457012 610 ntBASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 AL355877.3-201ENST00000622820 899 ntBASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 NCF1C-201ENST00000438382 1427 ntBASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC20.19■□□□□ 0.82
UPF3BQ9BZI7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UPF3BQ9BZI7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms