Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AL596275.1-201ENST00000423464 877 ntBASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 ATP5G1P1-201ENST00000448724 379 ntBASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 HLA-J-202ENST00000469281 1241 ntBASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AC091607.1-201ENST00000490318 1060 ntBASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 LY6E-213ENST00000522528 606 ntTSL 3 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC8.62□□□□□ -1.03
KRTAP3-1Q9BYR8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AC144831.1-201ENST00000573312 2656 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 TERF1P1-201ENST00000311003 1181 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AC003669.1-201ENST00000334569 611 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AC240504.1-201ENST00000395709 845 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 RWDD4P1-201ENST00000488019 565 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AL592071.1-201ENST00000611956 408 ntBASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
KRTAP3-1Q9BYR8 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms