Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 RN7SL828P-201ENST00000607615 303 ntBASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 AC004840.1-201ENST00000636359 365 ntBASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 RNF165-205ENST00000588679 2904 ntBASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
RTFDC1Q9BY42 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 KRT17P7-201ENST00000451704 1104 ntBASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 ZNF890P-202ENST00000530367 1156 ntBASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 SPTSSB-204ENST00000617024 1292 ntBASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 CETN4P-206ENST00000642099 2168 ntBASIC20.33■□□□□ 0.85
RTFDC1Q9BY42 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 AC007613.1-201ENST00000572811 2597 ntBASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RTFDC1Q9BY42 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AL132655.2-201ENST00000596276 594 ntBASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AL133215.2-201ENST00000609242 977 ntBASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RTFDC1Q9BY42 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 ATP5G2P4-201ENST00000442175 420 ntBASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 AL589739.1-201ENST00000607720 493 ntBASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RTFDC1Q9BY42 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms