Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 AC132872.4-202ENST00000622924 2756 ntBASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HERPUD2Q9BSE4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HERPUD2Q9BSE4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 AC026396.1-201ENST00000419388 421 ntBASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 AC025062.2-201ENST00000605477 670 ntBASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 REXO1L3P-201ENST00000622202 1288 ntBASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HERPUD2Q9BSE4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 HLA-J-202ENST00000469281 1241 ntBASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.5■□□□□ 0.39
HERPUD2Q9BSE4 MTDHP4-201ENST00000600287 670 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms