Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.78□□□□□ -0.2
RAB40CQ96S21 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RAB40CQ96S21 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RAB40CQ96S21 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AC211429.1-201ENST00000415277 523 ntBASIC13.77□□□□□ -0.21
RAB40CQ96S21 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AC007967.3-201ENST00000434308 558 ntBASIC13.77□□□□□ -0.21
RAB40CQ96S21 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 ZNF444P1-201ENST00000559497 298 ntBASIC13.77□□□□□ -0.21
RAB40CQ96S21 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 STK25P1-201ENST00000585406 838 ntBASIC13.77□□□□□ -0.21
RAB40CQ96S21 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 AL135999.2-201ENST00000622438 1686 ntBASIC13.77□□□□□ -0.21
RAB40CQ96S21 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RAB40CQ96S21 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 LINC00554-201ENST00000564841 3011 ntBASIC13.77□□□□□ -0.21
RAB40CQ96S21 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RAB40CQ96S21 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 SLC25A3P1-201ENST00000443844 931 ntBASIC13.76□□□□□ -0.21
RAB40CQ96S21 ATP5G1P1-201ENST00000448724 379 ntBASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC005363.2-201ENST00000618631 242 ntBASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC141257.4-201ENST00000634557 245 ntBASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC136944.6-201ENST00000634818 245 ntBASIC13.76□□□□□ -0.21
RAB40CQ96S21 AC097493.4-201ENST00000641197 219 ntBASIC13.76□□□□□ -0.21
RAB40CQ96S21 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAB40CQ96S21 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms