Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNGAP1Q96PV0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 MIR943-201ENST00000401286 94 ntBASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 SPDYE14P-201ENST00000442619 822 ntBASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 AC125807.1-201ENST00000483097 614 ntBASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 AC026150.2-201ENST00000564693 1156 ntBASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 WASH6P-202ENST00000359512 1437 ntBASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNGAP1Q96PV0 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SYNGAP1Q96PV0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 SPDYE7P-202ENST00000420373 878 ntBASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 AC016396.2-201ENST00000562575 1417 ntBASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 AC140878.1-201ENST00000565277 250 ntBASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 AC091167.2-201ENST00000579581 588 ntBASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
SYNGAP1Q96PV0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 EGFEM1P-202ENST00000431685 1563 ntBASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 UXT-AS1-201ENST00000590504 1525 ntBASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 BAD-202ENST00000394531 631 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNGAP1Q96PV0 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms