Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 PP14571-201ENST00000404327 934 ntTSL 2 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 SPDYE22P-201ENST00000582158 798 ntBASIC22.07■■□□□ 1.12
NBPF4Q96M43 GPER1-207ENST00000619052 571 ntTSL 2 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 AC022144.1-201ENST00000602255 1580 ntBASIC22.07■■□□□ 1.12
NBPF4Q96M43 AC073439.1-201ENST00000624121 1774 ntBASIC22.07■■□□□ 1.12
NBPF4Q96M43 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
NBPF4Q96M43 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC22.07■■□□□ 1.12
NBPF4Q96M43 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 AC124947.2-201ENST00000547118 1133 ntBASIC22.06■■□□□ 1.12
NBPF4Q96M43 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC22.06■■□□□ 1.12
NBPF4Q96M43 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NBPF4Q96M43 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 LY6E-204ENST00000519546 971 ntTSL 2 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 SIGLEC29P-201ENST00000599873 1114 ntBASIC22.05■■□□□ 1.12
NBPF4Q96M43 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 CECR7-204ENST00000609932 568 ntTSL 2 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 AC007613.1-201ENST00000572811 2597 ntBASIC22.05■■□□□ 1.12
NBPF4Q96M43 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.05■■□□□ 1.12
NBPF4Q96M43 AC006277.1-201ENST00000624348 1610 ntBASIC22.05■■□□□ 1.12
NBPF4Q96M43 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NBPF4Q96M43 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 PP12613-201ENST00000424958 2230 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 SPTLC1P1-201ENST00000447199 261 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 AC009477.1-201ENST00000452936 217 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 HLA-V-204ENST00000476601 1289 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 BANF1P1-201ENST00000553684 263 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 AC009407.1-201ENST00000568958 598 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 AL662799.1-202ENST00000614205 422 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 AC067852.2-201ENST00000590513 2313 ntBASIC22.04■■□□□ 1.12
NBPF4Q96M43 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
NBPF4Q96M43 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC22.04■■□□□ 1.12
NBPF4Q96M43 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NBPF4Q96M43 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NBPF4Q96M43 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 AC092068.3-201ENST00000587894 2016 ntBASIC22.03■■□□□ 1.12
NBPF4Q96M43 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NBPF4Q96M43 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NBPF4Q96M43 HLA-H-201ENST00000383620 1096 ntBASIC22.03■■□□□ 1.12
NBPF4Q96M43 HNRNPA3P1-201ENST00000401429 1139 ntBASIC22.03■■□□□ 1.12
NBPF4Q96M43 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 HNRNPA3P5-201ENST00000455201 833 ntBASIC22.03■■□□□ 1.12
NBPF4Q96M43 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.03■■□□□ 1.12
NBPF4Q96M43 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms