Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf72Q96LT7 NSUN5P1-202ENST00000421140 1535 ntBASIC17.47■□□□□ 0.39
C9orf72Q96LT7 NSUN5P2-203ENST00000457352 1529 ntBASIC17.47■□□□□ 0.39
C9orf72Q96LT7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 GPR89P-201ENST00000407924 1495 ntBASIC17.46■□□□□ 0.39
C9orf72Q96LT7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 FAM220CP-201ENST00000395253 831 ntBASIC17.46■□□□□ 0.39
C9orf72Q96LT7 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 AC091607.1-201ENST00000490318 1060 ntBASIC17.46■□□□□ 0.39
C9orf72Q96LT7 STK19B-204ENST00000512515 211 ntBASIC17.46■□□□□ 0.39
C9orf72Q96LT7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 AL353801.3-201ENST00000609898 542 ntBASIC17.46■□□□□ 0.39
C9orf72Q96LT7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf72Q96LT7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
C9orf72Q96LT7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.46■□□□□ 0.38
C9orf72Q96LT7 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf72Q96LT7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms