Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 WIZP1-201ENST00000531444 2299 ntBASIC18.13■□□□□ 0.49
ALPK3Q96L96 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 ELK2AP-201ENST00000392510 1007 ntBASIC18.13■□□□□ 0.49
ALPK3Q96L96 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 AC233724.13-201ENST00000598383 410 ntBASIC18.13■□□□□ 0.49
ALPK3Q96L96 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ALPK3Q96L96 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.13■□□□□ 0.49
ALPK3Q96L96 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 MIR5189-201ENST00000577370 114 ntBASIC18.12■□□□□ 0.49
ALPK3Q96L96 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.12■□□□□ 0.49
ALPK3Q96L96 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 TOP3BP1-201ENST00000420768 1380 ntBASIC18.12■□□□□ 0.49
ALPK3Q96L96 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.12■□□□□ 0.49
ALPK3Q96L96 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ALPK3Q96L96 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 AL033527.5-201ENST00000641382 801 ntBASIC18.11■□□□□ 0.49
ALPK3Q96L96 AL033527.5-202ENST00000641632 1098 ntBASIC18.11■□□□□ 0.49
ALPK3Q96L96 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 FLJ13224-201ENST00000313737 1514 ntBASIC18.11■□□□□ 0.49
ALPK3Q96L96 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 MIR3615-201ENST00000581999 87 ntBASIC18.11■□□□□ 0.49
ALPK3Q96L96 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 AL021578.1-201ENST00000613646 709 ntBASIC18.11■□□□□ 0.49
ALPK3Q96L96 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ALPK3Q96L96 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ALPK3Q96L96 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALPK3Q96L96 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ALPK3Q96L96 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALPK3Q96L96 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALPK3Q96L96 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ALPK3Q96L96 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.1■□□□□ 0.49
ALPK3Q96L96 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms