Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 MYCLP1-201ENST00000372451 1075 ntBASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 AC087499.1-201ENST00000418141 1075 ntBASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 LIN28AP1-201ENST00000429574 405 ntBASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 ATP5G1P1-201ENST00000448724 379 ntBASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CHMP6Q96FZ7 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 AL603832.2-201ENST00000566195 2125 ntBASIC17.08■□□□□ 0.33
CHMP6Q96FZ7 AC022532.1-201ENST00000624563 1728 ntBASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 MIR3917-201ENST00000580971 93 ntBASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 AC009154.2-201ENST00000621177 724 ntBASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHMP6Q96FZ7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 AL596087.1-201ENST00000400979 1969 ntBASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHMP6Q96FZ7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms