Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRC46Q96FV0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
LRRC46Q96FV0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRC46Q96FV0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AP006288.1-201ENST00000446065 395 ntBASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 AC006504.4-201ENST00000592118 1568 ntBASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRRC46Q96FV0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 AP002414.1-201ENST00000391405 1147 ntBASIC15.31■□□□□ 0.04
LRRC46Q96FV0 MKNK2P1-201ENST00000437526 628 ntBASIC15.31■□□□□ 0.04
LRRC46Q96FV0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 STK25P1-201ENST00000585406 838 ntBASIC15.31■□□□□ 0.04
LRRC46Q96FV0 C20orf181-201ENST00000623918 480 ntBASIC15.31■□□□□ 0.04
LRRC46Q96FV0 AC007064.4-201ENST00000637740 555 ntBASIC15.31■□□□□ 0.04
LRRC46Q96FV0 UBALD1-205ENST00000590891 2641 ntBASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRRC46Q96FV0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms