Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 SLC25A6P2-201ENST00000497974 877 ntBASIC17.23■□□□□ 0.35
RTP4Q96DX8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 AC120114.3-201ENST00000611923 658 ntBASIC17.23■□□□□ 0.35
RTP4Q96DX8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 OR6D1P-202ENST00000641007 5290 ntBASIC17.23■□□□□ 0.35
RTP4Q96DX8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
RTP4Q96DX8 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTP4Q96DX8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 AL512652.2-201ENST00000625156 1716 ntBASIC17.22■□□□□ 0.35
RTP4Q96DX8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 AC006557.2-201ENST00000592985 1240 ntBASIC17.22■□□□□ 0.35
RTP4Q96DX8 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 BX640515.1-201ENST00000617215 977 ntBASIC17.22■□□□□ 0.35
RTP4Q96DX8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RTP4Q96DX8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.22■□□□□ 0.35
RTP4Q96DX8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 AL590627.1-203ENST00000421194 1026 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 FAM197Y8-203ENST00000450145 560 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 AC107918.2-201ENST00000530817 355 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 AP001005.1-201ENST00000571755 1248 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 AL773604.1-201ENST00000617417 272 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 AL513523.2-202ENST00000427283 2040 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RTP4Q96DX8 PI4KAP1-204ENST00000612579 1703 ntBASIC17.21■□□□□ 0.35
RTP4Q96DX8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTP4Q96DX8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RTP4Q96DX8 KRT8P39-201ENST00000396270 1433 ntBASIC17.21■□□□□ 0.34
RTP4Q96DX8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTP4Q96DX8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTP4Q96DX8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RTP4Q96DX8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
RTP4Q96DX8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.21■□□□□ 0.34
RTP4Q96DX8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.2■□□□□ 0.34
RTP4Q96DX8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RTP4Q96DX8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms