Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 AC022616.7-201ENST00000525383 220 ntBASIC16.31■□□□□ 0.2
VPS33AQ96AX1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 AD001527.2-201ENST00000622994 785 ntBASIC16.31■□□□□ 0.2
VPS33AQ96AX1 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 AL513523.2-202ENST00000427283 2040 ntBASIC16.31■□□□□ 0.2
VPS33AQ96AX1 PAUPAR-201ENST00000630360 2965 ntBASIC16.31■□□□□ 0.2
VPS33AQ96AX1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
VPS33AQ96AX1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AC073592.5-201ENST00000624854 528 ntBASIC16.3■□□□□ 0.2
VPS33AQ96AX1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 AC007950.2-201ENST00000615045 2347 ntBASIC16.3■□□□□ 0.2
VPS33AQ96AX1 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
VPS33AQ96AX1 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
VPS33AQ96AX1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms