Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
NCLNQ969V3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 AC005104.2-201ENST00000427818 678 ntBASIC16.48■□□□□ 0.23
NCLNQ969V3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.48■□□□□ 0.23
NCLNQ969V3 SAPCD2P3-201ENST00000455031 850 ntBASIC16.48■□□□□ 0.23
NCLNQ969V3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 REXO1L6P-202ENST00000619970 1078 ntBASIC16.48■□□□□ 0.23
NCLNQ969V3 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NCLNQ969V3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.48■□□□□ 0.23
NCLNQ969V3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NCLNQ969V3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NCLNQ969V3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NCLNQ969V3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.48■□□□□ 0.23
NCLNQ969V3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 PCDH8P1-201ENST00000428983 2773 ntBASIC16.47■□□□□ 0.23
NCLNQ969V3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 COX5BP2-201ENST00000392354 334 ntBASIC16.47■□□□□ 0.23
NCLNQ969V3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
NCLNQ969V3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 FAAHP1-202ENST00000446499 1238 ntBASIC16.47■□□□□ 0.23
NCLNQ969V3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.47■□□□□ 0.23
NCLNQ969V3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.47■□□□□ 0.23
NCLNQ969V3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.47■□□□□ 0.23
NCLNQ969V3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 AL139327.4-201ENST00000612362 153 ntBASIC16.47■□□□□ 0.23
NCLNQ969V3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.47■□□□□ 0.23
NCLNQ969V3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NCLNQ969V3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
NCLNQ969V3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.46■□□□□ 0.23
NCLNQ969V3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.46■□□□□ 0.23
NCLNQ969V3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
NCLNQ969V3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NCLNQ969V3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.46■□□□□ 0.23
NCLNQ969V3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
NCLNQ969V3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.46■□□□□ 0.23
NCLNQ969V3 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
NCLNQ969V3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
NCLNQ969V3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
NCLNQ969V3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms