Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 ATP5G2P1-201ENST00000433580 426 ntBASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 MIR3180-1-201ENST00000580374 94 ntBASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 MIR3180-3-201ENST00000584616 94 ntBASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 NPAP1P7-201ENST00000613027 823 ntBASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTN4IP1Q8WWV3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 FAM220CP-201ENST00000395253 831 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 KRT17P6-201ENST00000453795 1220 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 MINOS1P3-201ENST00000457048 203 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 AC122714.2-201ENST00000502787 707 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 AC093458.2-201ENST00000623150 629 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 EGFEM1P-202ENST00000431685 1563 ntBASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTN4IP1Q8WWV3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTN4IP1Q8WWV3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms