Protein–RNA interactions for Protein: Q8WWF5

ZNRF4, E3 ubiquitin-protein ligase ZNRF4, humanhuman

Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF4Q8WWF5 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 AP005117.1-201ENST00000584346 1413 ntBASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 BX005266.1-201ENST00000473402 457 ntBASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 KRT18P35-201ENST00000510488 1269 ntBASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 AL591684.3-201ENST00000605187 298 ntBASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 AC243591.1-201ENST00000452967 1364 ntBASIC15.11■□□□□ 0.01
ZNRF4Q8WWF5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 AC138894.3-201ENST00000603787 634 ntBASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 AL353135.1-201ENST00000606729 504 ntBASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.1■□□□□ 0.01
ZNRF4Q8WWF5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 AC132872.4-202ENST00000622924 2756 ntBASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ZNRF4Q8WWF5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms