Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 SDHAP3-202ENST00000515467 728 ntBASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AL162726.2-201ENST00000438986 1017 ntBASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 SLC25A47P1-201ENST00000531577 414 ntBASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 SIGLEC29P-201ENST00000599873 1114 ntBASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AC074044.1-201ENST00000609673 707 ntBASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AL033527.5-202ENST00000641632 1098 ntBASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
ALMS1Q8TCU4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 CTBP2P5-201ENST00000454986 1264 ntBASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 C2orf69P2-201ENST00000562032 1123 ntBASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AL158212.4-201ENST00000624062 1286 ntBASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 RETN-203ENST00000629642 400 ntTSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC026471.1-201ENST00000564629 3026 ntBASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 RNA5SP410-201ENST00000516285 106 ntBASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC021097.1-201ENST00000607902 574 ntBASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
ALMS1Q8TCU4 KRT90P-201ENST00000549264 1064 ntBASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
ALMS1Q8TCU4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms