Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFWD2Q8NHY2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 AL353692.3-201ENST00000407031 1396 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 IGHGP-201ENST00000390555 1178 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 AC139887.4-201ENST00000607877 719 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 GPR89P-201ENST00000407924 1495 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 AL135999.2-201ENST00000622438 1686 ntBASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFWD2Q8NHY2 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 AC007967.3-201ENST00000434308 558 ntBASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFWD2Q8NHY2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD2Q8NHY2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD2Q8NHY2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD2Q8NHY2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFWD2Q8NHY2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD2Q8NHY2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RFWD2Q8NHY2 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms