Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 DUX4L17-201ENST00000557360 1267 ntBASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 AC080080.1-201ENST00000625121 2420 ntBASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
SRFBP1Q8NEF9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 AC092910.1-201ENST00000482027 1129 ntBASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 AC012640.2-201ENST00000561606 901 ntBASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 SLC25A6P4-201ENST00000586535 553 ntBASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 AP002414.3-201ENST00000589352 1468 ntBASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SRFBP1Q8NEF9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 MRPL3P1-201ENST00000400109 1033 ntBASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 MRPL20P1-201ENST00000400819 433 ntBASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SRFBP1Q8NEF9 AC002310.6-201ENST00000624451 1377 ntBASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SRFBP1Q8NEF9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms