Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.15■□□□□ 0.34
SYNPOQ8N3V7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.14■□□□□ 0.34
SYNPOQ8N3V7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SYNPOQ8N3V7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
SYNPOQ8N3V7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 MIR346-201ENST00000362234 95 ntBASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 GAPDHP21-201ENST00000450301 1010 ntBASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 ALG1L8P-201ENST00000533887 760 ntBASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 AC027307.3-201ENST00000594262 1100 ntBASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 AL390754.1-201ENST00000619088 582 ntBASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 AL358472.5-202ENST00000641448 1267 ntBASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SYNPOQ8N3V7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 MIR661-201ENST00000384842 89 ntBASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 UGT1A2P-201ENST00000454886 866 ntBASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 AC097493.3-201ENST00000509725 367 ntBASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 AC091167.2-201ENST00000579581 588 ntBASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 MIR6080-201ENST00000617359 66 ntBASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SYNPOQ8N3V7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms