Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
XRN1Q8IZH2 AC104581.1-202ENST00000635932 2618 ntBASIC23.06■■□□□ 1.28
XRN1Q8IZH2 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 NOP2-211ENST00000540228 668 ntTSL 2 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
XRN1Q8IZH2 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 PC-204ENST00000524491 1714 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 MYCLP2-201ENST00000449268 967 ntBASIC23.05■■□□□ 1.28
XRN1Q8IZH2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 SNX12-206ENST00000622259 661 ntTSL 5 BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
XRN1Q8IZH2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 BNIP3P42-201ENST00000454982 569 ntBASIC23.04■■□□□ 1.28
XRN1Q8IZH2 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 BNIP3P29-201ENST00000598302 571 ntBASIC23.04■■□□□ 1.28
XRN1Q8IZH2 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 AC011447.5-201ENST00000616168 564 ntBASIC23.04■■□□□ 1.28
XRN1Q8IZH2 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 REXO1L6P-201ENST00000603433 1515 ntBASIC23.04■■□□□ 1.28
XRN1Q8IZH2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
XRN1Q8IZH2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
XRN1Q8IZH2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms