Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCDC170Q8IYT3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CCDC170Q8IYT3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 AC006277.1-201ENST00000624348 1610 ntBASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 SPDYE21P-201ENST00000413323 827 ntBASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 AL121672.3-201ENST00000608644 468 ntBASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
CCDC170Q8IYT3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 AC097637.2-201ENST00000624096 1997 ntBASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 BX276092.5-203ENST00000456199 560 ntBASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 AC105917.1-201ENST00000506637 2539 ntBASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CCDC170Q8IYT3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 AC233702.3-201ENST00000578656 1387 ntBASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 AC004817.3-201ENST00000602957 2129 ntBASIC18.18■□□□□ 0.5
CCDC170Q8IYT3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms