Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TMEFF1Q8IYR6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 NOC2LP2-201ENST00000407594 1944 ntBASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 SERBP1P5-201ENST00000510079 1181 ntBASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.74■□□□□ 0.27
TMEFF1Q8IYR6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 SLC22A20-204ENST00000530038 1673 ntBASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 AL355312.1-201ENST00000407115 2176 ntBASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 MIR346-201ENST00000362234 95 ntBASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 AC241585.1-201ENST00000433527 519 ntBASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 CRB3P1-201ENST00000449338 276 ntBASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 AC027369.6-201ENST00000525520 931 ntBASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.73■□□□□ 0.27
TMEFF1Q8IYR6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 AC016027.1-202ENST00000607927 1699 ntBASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 AL138918.1-201ENST00000568306 659 ntBASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEFF1Q8IYR6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEFF1Q8IYR6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms