Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 BX005266.1-201ENST00000473402 457 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 KRT126P-201ENST00000549467 1181 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AL355877.3-201ENST00000622820 899 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AL356309.3-201ENST00000624132 1934 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 AL135999.2-201ENST00000622438 1686 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 CYP2T1P-202ENST00000641596 2535 ntBASIC15.44■□□□□ 0.06
NIPAL3Q6P499 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
NIPAL3Q6P499 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 EMBP1-201ENST00000458200 901 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AF238378.1-201ENST00000526806 358 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 NKAPP1-205ENST00000585790 367 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AL691432.3-201ENST00000621860 400 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AL139288.1-201ENST00000623748 933 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 AC004817.3-201ENST00000602957 2129 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SIGLEC16-201ENST00000599858 1437 ntBASIC15.43■□□□□ 0.06
NIPAL3Q6P499 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 AL391005.1-201ENST00000623953 2435 ntBASIC15.42■□□□□ 0.06
NIPAL3Q6P499 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NIPAL3Q6P499 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms