Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 NORAD-201ENST00000565493 5339 ntBASIC17.1■□□□□ 0.33
LGSNQ5TDP6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 LINC01238-205ENST00000567549 1107 ntBASIC17.1■□□□□ 0.33
LGSNQ5TDP6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 AC011498.5-201ENST00000592027 486 ntBASIC17.1■□□□□ 0.33
LGSNQ5TDP6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 AC083849.1-201ENST00000615227 514 ntBASIC17.1■□□□□ 0.33
LGSNQ5TDP6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 CICP6-201ENST00000457191 2729 ntBASIC17.1■□□□□ 0.33
LGSNQ5TDP6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGSNQ5TDP6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 AL845331.1-201ENST00000424978 1190 ntBASIC17.09■□□□□ 0.33
LGSNQ5TDP6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 AL671277.2-201ENST00000458060 996 ntBASIC17.09■□□□□ 0.33
LGSNQ5TDP6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 KRT8P26-201ENST00000534154 1276 ntBASIC17.09■□□□□ 0.33
LGSNQ5TDP6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 AC011467.2-201ENST00000598425 242 ntBASIC17.09■□□□□ 0.33
LGSNQ5TDP6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.09■□□□□ 0.33
LGSNQ5TDP6 AC006011.2-201ENST00000621313 1158 ntBASIC17.09■□□□□ 0.33
LGSNQ5TDP6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGSNQ5TDP6 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms