Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 MIR770-201ENST00000390219 98 ntBASIC20.13■□□□□ 0.81
PDS5AQ29RF7 HNRNPFP1-201ENST00000391730 1133 ntBASIC20.13■□□□□ 0.81
PDS5AQ29RF7 SPDYE7P-202ENST00000420373 878 ntBASIC20.13■□□□□ 0.81
PDS5AQ29RF7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 FOXO1B-201ENST00000504678 1527 ntBASIC20.13■□□□□ 0.81
PDS5AQ29RF7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDS5AQ29RF7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
PDS5AQ29RF7 AL645608.8-201ENST00000606034 2086 ntBASIC20.12■□□□□ 0.81
PDS5AQ29RF7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 PRYP6-201ENST00000514804 343 ntBASIC20.11■□□□□ 0.81
PDS5AQ29RF7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 AL391256.1-201ENST00000443260 1855 ntBASIC20.11■□□□□ 0.81
PDS5AQ29RF7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDS5AQ29RF7 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TUBB3P1-201ENST00000405796 1332 ntBASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 SPCS2P1-201ENST00000561636 679 ntBASIC20.1■□□□□ 0.81
PDS5AQ29RF7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.1■□□□□ 0.81
PDS5AQ29RF7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms