Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC091046.1-201ENST00000331871 207 ntBASIC20.98■□□□□ 0.95
R3HDM1Q15032 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AL662890.1-201ENST00000396818 632 ntBASIC20.98■□□□□ 0.95
R3HDM1Q15032 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 OARD1-212ENST00000482515 832 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC092337.1-201ENST00000568699 1129 ntBASIC20.98■□□□□ 0.95
R3HDM1Q15032 MIR4492-201ENST00000581627 80 ntBASIC20.98■□□□□ 0.95
R3HDM1Q15032 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 CU634019.7-201ENST00000624153 1185 ntBASIC20.98■□□□□ 0.95
R3HDM1Q15032 FP236241.2-201ENST00000624906 1185 ntBASIC20.98■□□□□ 0.95
R3HDM1Q15032 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM1Q15032 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
R3HDM1Q15032 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 AC104306.2-201ENST00000451877 341 ntBASIC20.97■□□□□ 0.95
R3HDM1Q15032 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 RARRES2P5-201ENST00000564013 466 ntBASIC20.97■□□□□ 0.95
R3HDM1Q15032 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 AC025048.3-201ENST00000590609 569 ntBASIC20.97■□□□□ 0.95
R3HDM1Q15032 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
R3HDM1Q15032 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM1Q15032 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 AC005077.2-201ENST00000449786 690 ntBASIC20.96■□□□□ 0.95
R3HDM1Q15032 AKR7A2P1-201ENST00000460134 915 ntBASIC20.96■□□□□ 0.95
R3HDM1Q15032 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 HNRNPA1P13-201ENST00000510646 963 ntBASIC20.96■□□□□ 0.95
R3HDM1Q15032 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 MPDU1-223ENST00000582151 728 ntBASIC20.96■□□□□ 0.95
R3HDM1Q15032 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 AC244452.3-201ENST00000636814 210 ntBASIC20.96■□□□□ 0.95
R3HDM1Q15032 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 REXO1L11P-201ENST00000620964 1927 ntBASIC20.96■□□□□ 0.95
R3HDM1Q15032 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM1Q15032 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
R3HDM1Q15032 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
R3HDM1Q15032 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
R3HDM1Q15032 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.95■□□□□ 0.94
R3HDM1Q15032 KRT8P19-201ENST00000551916 1455 ntBASIC20.95■□□□□ 0.94
R3HDM1Q15032 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.95■□□□□ 0.94
R3HDM1Q15032 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HDM1Q15032 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
R3HDM1Q15032 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
R3HDM1Q15032 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HDM1Q15032 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HDM1Q15032 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HDM1Q15032 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms