Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 AC006277.1-201ENST00000624348 1610 ntBASIC17.1■□□□□ 0.33
CDH17Q12864 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH17Q12864 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH17Q12864 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH17Q12864 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 PCDHB19P-201ENST00000570871 2371 ntBASIC17.09■□□□□ 0.33
CDH17Q12864 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH17Q12864 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH17Q12864 UNC93B7-201ENST00000509439 705 ntBASIC17.09■□□□□ 0.33
CDH17Q12864 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH17Q12864 OR7E14P-202ENST00000530490 1290 ntBASIC17.09■□□□□ 0.33
CDH17Q12864 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.09■□□□□ 0.33
CDH17Q12864 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH17Q12864 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH17Q12864 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH17Q12864 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH17Q12864 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH17Q12864 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH17Q12864 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH17Q12864 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
CDH17Q12864 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH17Q12864 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDH17Q12864 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CDH17Q12864 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CDH17Q12864 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
CDH17Q12864 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CDH17Q12864 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH17Q12864 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH17Q12864 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH17Q12864 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH17Q12864 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH17Q12864 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH17Q12864 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH17Q12864 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH17Q12864 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH17Q12864 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.08■□□□□ 0.32
CDH17Q12864 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.08■□□□□ 0.32
CDH17Q12864 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.08■□□□□ 0.32
CDH17Q12864 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH17Q12864 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDH17Q12864 AL139011.1-202ENST00000642063 584 ntBASIC17.08■□□□□ 0.32
CDH17Q12864 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH17Q12864 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH17Q12864 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CDH17Q12864 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH17Q12864 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDH17Q12864 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH17Q12864 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
CDH17Q12864 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CDH17Q12864 AC006538.1-201ENST00000567905 1585 ntBASIC17.07■□□□□ 0.32
CDH17Q12864 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CDH17Q12864 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH17Q12864 AC002310.6-201ENST00000624451 1377 ntBASIC17.07■□□□□ 0.32
CDH17Q12864 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH17Q12864 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH17Q12864 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CDH17Q12864 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH17Q12864 KRT18P27-201ENST00000427733 1299 ntBASIC17.07■□□□□ 0.32
CDH17Q12864 RPS2P1-201ENST00000434010 821 ntBASIC17.07■□□□□ 0.32
CDH17Q12864 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms