Protein–RNA interactions for Protein: Q09161

NCBP1, Nuclear cap-binding protein subunit 1, humanhuman

Known RBP Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP1Q09161 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
NCBP1Q09161 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.24■□□□□ 0.67
NCBP1Q09161 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 AC025062.2-201ENST00000605477 670 ntBASIC19.24■□□□□ 0.67
NCBP1Q09161 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 AC107918.4-202ENST00000641623 219 ntBASIC19.24■□□□□ 0.67
NCBP1Q09161 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NCBP1Q09161 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.24■□□□□ 0.67
NCBP1Q09161 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.24■□□□□ 0.67
NCBP1Q09161 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.24■□□□□ 0.67
NCBP1Q09161 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCBP1Q09161 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.23■□□□□ 0.67
NCBP1Q09161 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.23■□□□□ 0.67
NCBP1Q09161 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 KLF4P1-201ENST00000412782 1185 ntBASIC19.23■□□□□ 0.67
NCBP1Q09161 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 LAGE3P1-201ENST00000425356 484 ntBASIC19.23■□□□□ 0.67
NCBP1Q09161 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 SIGLEC30P-201ENST00000455569 941 ntBASIC19.23■□□□□ 0.67
NCBP1Q09161 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.23■□□□□ 0.67
NCBP1Q09161 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.23■□□□□ 0.67
NCBP1Q09161 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.23■□□□□ 0.67
NCBP1Q09161 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.23■□□□□ 0.67
NCBP1Q09161 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.23■□□□□ 0.67
NCBP1Q09161 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
NCBP1Q09161 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.23■□□□□ 0.67
NCBP1Q09161 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.23■□□□□ 0.67
NCBP1Q09161 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCBP1Q09161 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
NCBP1Q09161 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NCBP1Q09161 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NCBP1Q09161 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NCBP1Q09161 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NCBP1Q09161 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.22■□□□□ 0.67
NCBP1Q09161 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.22■□□□□ 0.67
NCBP1Q09161 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.22■□□□□ 0.67
NCBP1Q09161 AC002558.1-201ENST00000488906 803 ntBASIC19.22■□□□□ 0.67
NCBP1Q09161 AC116407.3-201ENST00000623905 1129 ntBASIC19.22■□□□□ 0.67
NCBP1Q09161 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.22■□□□□ 0.67
NCBP1Q09161 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC19.22■□□□□ 0.67
NCBP1Q09161 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.22■□□□□ 0.67
NCBP1Q09161 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.22■□□□□ 0.67
NCBP1Q09161 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCBP1Q09161 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCBP1Q09161 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCBP1Q09161 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NCBP1Q09161 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.21■□□□□ 0.67
NCBP1Q09161 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.21■□□□□ 0.67
NCBP1Q09161 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.21■□□□□ 0.67
NCBP1Q09161 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms