Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
YBX1P67809 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.51■□□□□ 0.23
YBX1P67809 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
YBX1P67809 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 PI4KAP1-204ENST00000612579 1703 ntBASIC16.5■□□□□ 0.23
YBX1P67809 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
YBX1P67809 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 PCDHA1-201ENST00000378133 2726 ntBASIC16.5■□□□□ 0.23
YBX1P67809 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.5■□□□□ 0.23
YBX1P67809 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.5■□□□□ 0.23
YBX1P67809 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.5■□□□□ 0.23
YBX1P67809 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.5■□□□□ 0.23
YBX1P67809 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 AC093909.1-201ENST00000504731 1122 ntBASIC16.5■□□□□ 0.23
YBX1P67809 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.5■□□□□ 0.23
YBX1P67809 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.5■□□□□ 0.23
YBX1P67809 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.5■□□□□ 0.23
YBX1P67809 AC120114.3-201ENST00000611923 658 ntBASIC16.5■□□□□ 0.23
YBX1P67809 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.5■□□□□ 0.23
YBX1P67809 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
YBX1P67809 PCDHB17P-201ENST00000539533 2393 ntBASIC16.5■□□□□ 0.23
YBX1P67809 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 AC092364.2-201ENST00000596710 2692 ntBASIC16.5■□□□□ 0.23
YBX1P67809 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
YBX1P67809 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 TERC-201ENST00000602385 541 ntBASIC16.49■□□□□ 0.23
YBX1P67809 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 MIR1199-201ENST00000621445 119 ntBASIC16.49■□□□□ 0.23
YBX1P67809 AL805961.1-202ENST00000641562 540 ntBASIC16.49■□□□□ 0.23
YBX1P67809 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.49■□□□□ 0.23
YBX1P67809 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
YBX1P67809 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
YBX1P67809 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.49■□□□□ 0.23
YBX1P67809 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.48■□□□□ 0.23
YBX1P67809 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 AC104109.2-201ENST00000602919 1418 ntBASIC16.48■□□□□ 0.23
YBX1P67809 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
YBX1P67809 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
YBX1P67809 AC009947.1-201ENST00000444350 727 ntBASIC16.48■□□□□ 0.23
YBX1P67809 PAWRP1-201ENST00000451083 565 ntBASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms