Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.69■□□□□ 0.26
SRP54P61011 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SRP54P61011 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
SRP54P61011 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SRP54P61011 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SRP54P61011 AC116353.5-201ENST00000638148 1699 ntBASIC16.69■□□□□ 0.26
SRP54P61011 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.69■□□□□ 0.26
SRP54P61011 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SRP54P61011 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.68■□□□□ 0.26
SRP54P61011 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.68■□□□□ 0.26
SRP54P61011 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.68■□□□□ 0.26
SRP54P61011 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.68■□□□□ 0.26
SRP54P61011 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SRP54P61011 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SRP54P61011 AC140658.5-201ENST00000438532 169 ntBASIC16.68■□□□□ 0.26
SRP54P61011 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.68■□□□□ 0.26
SRP54P61011 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.68■□□□□ 0.26
SRP54P61011 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.68■□□□□ 0.26
SRP54P61011 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.68■□□□□ 0.26
SRP54P61011 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.68■□□□□ 0.26
SRP54P61011 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
SRP54P61011 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.68■□□□□ 0.26
SRP54P61011 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.68■□□□□ 0.26
SRP54P61011 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SRP54P61011 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 TNRC18P3-201ENST00000441896 2691 ntBASIC16.67■□□□□ 0.26
SRP54P61011 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP54P61011 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SRP54P61011 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.67■□□□□ 0.26
SRP54P61011 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 METTL21AP1-201ENST00000438852 635 ntBASIC16.67■□□□□ 0.26
SRP54P61011 AP000344.2-201ENST00000512987 629 ntBASIC16.67■□□□□ 0.26
SRP54P61011 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP54P61011 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.67■□□□□ 0.26
SRP54P61011 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP54P61011 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.67■□□□□ 0.26
SRP54P61011 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.67■□□□□ 0.26
SRP54P61011 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP54P61011 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SRP54P61011 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SRP54P61011 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SRP54P61011 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.67■□□□□ 0.26
SRP54P61011 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SRP54P61011 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 AC141586.5-201ENST00000624546 2050 ntBASIC16.66■□□□□ 0.26
SRP54P61011 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.66■□□□□ 0.26
SRP54P61011 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.66■□□□□ 0.26
SRP54P61011 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP54P61011 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP54P61011 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.66■□□□□ 0.26
SRP54P61011 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP54P61011 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP54P61011 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP54P61011 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SRP54P61011 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SRP54P61011 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.66■□□□□ 0.26
SRP54P61011 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms