Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 HLA-H-201ENST00000383620 1096 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.65■□□□□ 0.42
ERVFC1P60507 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 RPL37AP1-201ENST00000412502 279 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC17.65■□□□□ 0.42
ERVFC1P60507 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.65■□□□□ 0.42
ERVFC1P60507 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.65■□□□□ 0.42
ERVFC1P60507 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.65■□□□□ 0.42
ERVFC1P60507 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.65■□□□□ 0.42
ERVFC1P60507 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.65■□□□□ 0.42
ERVFC1P60507 TP53TG3HP-202ENST00000569755 579 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 AL844908.2-201ENST00000609461 460 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
ERVFC1P60507 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
ERVFC1P60507 AC087499.5-201ENST00000452760 1342 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 AL035456.1-201ENST00000456064 1369 ntBASIC17.65■□□□□ 0.42
ERVFC1P60507 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERVFC1P60507 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
ERVFC1P60507 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.64■□□□□ 0.42
ERVFC1P60507 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERVFC1P60507 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ERVFC1P60507 CU639417.3-201ENST00000624240 1404 ntBASIC17.64■□□□□ 0.42
ERVFC1P60507 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERVFC1P60507 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.64■□□□□ 0.41
ERVFC1P60507 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ERVFC1P60507 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.64■□□□□ 0.41
ERVFC1P60507 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.64■□□□□ 0.41
ERVFC1P60507 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.64■□□□□ 0.41
ERVFC1P60507 MTND6P24-201ENST00000440466 518 ntBASIC17.64■□□□□ 0.41
ERVFC1P60507 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.64■□□□□ 0.41
ERVFC1P60507 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 RN7SL828P-201ENST00000607615 303 ntBASIC17.64■□□□□ 0.41
ERVFC1P60507 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERVFC1P60507 AC116353.5-201ENST00000638148 1699 ntBASIC17.64■□□□□ 0.41
ERVFC1P60507 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERVFC1P60507 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.64■□□□□ 0.41
ERVFC1P60507 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 AC007541.1-201ENST00000570282 1469 ntBASIC17.63■□□□□ 0.41
ERVFC1P60507 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
ERVFC1P60507 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.63■□□□□ 0.41
ERVFC1P60507 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
ERVFC1P60507 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.63■□□□□ 0.41
ERVFC1P60507 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.63■□□□□ 0.41
ERVFC1P60507 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.63■□□□□ 0.41
ERVFC1P60507 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 KRT17P7-201ENST00000451704 1104 ntBASIC17.63■□□□□ 0.41
ERVFC1P60507 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 API5-211ENST00000534695 560 ntTSL 5 BASIC17.63■□□□□ 0.41
ERVFC1P60507 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.63■□□□□ 0.41
ERVFC1P60507 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.63■□□□□ 0.41
ERVFC1P60507 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.63■□□□□ 0.41
ERVFC1P60507 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.63■□□□□ 0.41
ERVFC1P60507 AL589739.1-201ENST00000607720 493 ntBASIC17.63■□□□□ 0.41
ERVFC1P60507 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 SPTSSB-204ENST00000617024 1292 ntBASIC17.63■□□□□ 0.41
ERVFC1P60507 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 AC004840.1-201ENST00000636359 365 ntBASIC17.63■□□□□ 0.41
ERVFC1P60507 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.63■□□□□ 0.41
ERVFC1P60507 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.63■□□□□ 0.41
ERVFC1P60507 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERVFC1P60507 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms