Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC21.32■■□□□ 1
KCNQ4P56696 AC011495.1-201ENST00000498085 584 ntBASIC21.32■■□□□ 1
KCNQ4P56696 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
KCNQ4P56696 AC087289.5-201ENST00000586076 3175 ntBASIC21.32■■□□□ 1
KCNQ4P56696 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.32■■□□□ 1
KCNQ4P56696 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.32■■□□□ 1
KCNQ4P56696 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ4P56696 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 TNXA-203ENST00000507684 2038 ntBASIC21.31■■□□□ 1
KCNQ4P56696 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 FAM220BP-201ENST00000377689 816 ntBASIC21.31■■□□□ 1
KCNQ4P56696 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 TTTY23B-201ENST00000442790 549 ntBASIC21.31■■□□□ 1
KCNQ4P56696 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ4P56696 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ4P56696 AL589987.1-201ENST00000453380 819 ntBASIC21.31■■□□□ 1
KCNQ4P56696 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC21.31■■□□□ 1
KCNQ4P56696 PACS1-203ENST00000524815 628 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ4P56696 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 AC106886.1-201ENST00000568660 600 ntBASIC21.31■■□□□ 1
KCNQ4P56696 MIR4538-201ENST00000581377 78 ntBASIC21.31■■□□□ 1
KCNQ4P56696 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.31■■□□□ 1
KCNQ4P56696 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC21.31■■□□□ 1
KCNQ4P56696 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.31■■□□□ 1
KCNQ4P56696 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 MIR6775-201ENST00000617557 69 ntBASIC21.31■■□□□ 1
KCNQ4P56696 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
KCNQ4P56696 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.31■■□□□ 1
KCNQ4P56696 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KCNQ4P56696 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.3■■□□□ 1
KCNQ4P56696 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.3■■□□□ 1
KCNQ4P56696 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.3■■□□□ 1
KCNQ4P56696 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.3■■□□□ 1
KCNQ4P56696 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 AC098850.1-201ENST00000419919 790 ntBASIC21.3■■□□□ 1
KCNQ4P56696 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.3■■□□□ 1
KCNQ4P56696 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 RNA5SP410-201ENST00000516285 106 ntBASIC21.3■■□□□ 1
KCNQ4P56696 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC21.3■■□□□ 1
KCNQ4P56696 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
KCNQ4P56696 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC21.3■■□□□ 1
KCNQ4P56696 AL391825.1-201ENST00000457671 1364 ntBASIC21.3■■□□□ 1
KCNQ4P56696 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
KCNQ4P56696 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.3■■□□□ 1
KCNQ4P56696 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
KCNQ4P56696 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.29■■□□□ 1
KCNQ4P56696 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
KCNQ4P56696 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.29■■□□□ 1
KCNQ4P56696 AL671710.1-201ENST00000610245 2349 ntBASIC21.29■■□□□ 1
KCNQ4P56696 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC21.29■■□□□ 1
KCNQ4P56696 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 SLC7A15P-201ENST00000424028 1363 ntBASIC21.29■■□□□ 1
KCNQ4P56696 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KCNQ4P56696 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
KCNQ4P56696 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KCNQ4P56696 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC21.29■■□□□ 1
KCNQ4P56696 MAX-210ENST00000555419 765 ntTSL 5 BASIC21.29■■□□□ 1
KCNQ4P56696 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC21.29■■□□□ 1
KCNQ4P56696 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.29■■□□□ 1
KCNQ4P56696 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms