Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 AC007326.2-201ENST00000624224 7579 ntBASIC12.59□□□□□ -0.39
CMC4P56277 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 AC012569.1-201ENST00000591191 1524 ntBASIC12.59□□□□□ -0.39
CMC4P56277 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.59□□□□□ -0.39
CMC4P56277 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CMC4P56277 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 RHOQP3-201ENST00000437982 621 ntBASIC12.59□□□□□ -0.39
CMC4P56277 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.59□□□□□ -0.39
CMC4P56277 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 AC013467.2-201ENST00000605472 835 ntBASIC12.59□□□□□ -0.39
CMC4P56277 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.59□□□□□ -0.39
CMC4P56277 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 AL139011.1-202ENST00000642063 584 ntBASIC12.59□□□□□ -0.39
CMC4P56277 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 PCDHB18P-201ENST00000524813 2368 ntBASIC12.59□□□□□ -0.39
CMC4P56277 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC12.59□□□□□ -0.39
CMC4P56277 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CMC4P56277 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CMC4P56277 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CMC4P56277 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.59□□□□□ -0.39
CMC4P56277 CEP83-AS1-201ENST00000623122 2482 ntBASIC12.59□□□□□ -0.39
CMC4P56277 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CMC4P56277 AC063926.3-201ENST00000624734 5658 ntBASIC12.58□□□□□ -0.39
CMC4P56277 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
CMC4P56277 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.58□□□□□ -0.4
CMC4P56277 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.58□□□□□ -0.4
CMC4P56277 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 MPDU1-223ENST00000582151 728 ntBASIC12.58□□□□□ -0.4
CMC4P56277 RNF165-205ENST00000588679 2904 ntBASIC12.58□□□□□ -0.4
CMC4P56277 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.58□□□□□ -0.4
CMC4P56277 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC12.58□□□□□ -0.4
CMC4P56277 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.58□□□□□ -0.4
CMC4P56277 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CMC4P56277 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CMC4P56277 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CMC4P56277 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CMC4P56277 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CMC4P56277 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms