Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 ALOX12P2-203ENST00000570921 1945 ntBASIC16.59■□□□□ 0.25
CDH13P55290 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH13P55290 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.59■□□□□ 0.25
CDH13P55290 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.59■□□□□ 0.25
CDH13P55290 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
CDH13P55290 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH13P55290 AC138894.3-201ENST00000603787 634 ntBASIC16.59■□□□□ 0.25
CDH13P55290 AL591684.3-201ENST00000605187 298 ntBASIC16.59■□□□□ 0.25
CDH13P55290 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 AC073592.4-201ENST00000623827 446 ntBASIC16.59■□□□□ 0.25
CDH13P55290 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH13P55290 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDH13P55290 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.58■□□□□ 0.25
CDH13P55290 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.58■□□□□ 0.25
CDH13P55290 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDH13P55290 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH13P55290 CICP6-201ENST00000457191 2729 ntBASIC16.58■□□□□ 0.25
CDH13P55290 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.25
CDH13P55290 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.58■□□□□ 0.25
CDH13P55290 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH13P55290 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 AC132008.2-207ENST00000454517 770 ntBASIC16.58■□□□□ 0.24
CDH13P55290 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH13P55290 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH13P55290 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH13P55290 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH13P55290 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 AP001269.4-201ENST00000609611 512 ntBASIC16.58■□□□□ 0.24
CDH13P55290 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.58■□□□□ 0.24
CDH13P55290 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.58■□□□□ 0.24
CDH13P55290 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CDH13P55290 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CDH13P55290 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.58■□□□□ 0.24
CDH13P55290 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDH13P55290 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDH13P55290 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH13P55290 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CDH13P55290 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH13P55290 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH13P55290 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 AP005117.1-201ENST00000584346 1413 ntBASIC16.57■□□□□ 0.24
CDH13P55290 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.57■□□□□ 0.24
CDH13P55290 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDH13P55290 BX005266.1-201ENST00000473402 457 ntBASIC16.57■□□□□ 0.24
CDH13P55290 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.57■□□□□ 0.24
CDH13P55290 AP002490.2-201ENST00000524791 560 ntBASIC16.57■□□□□ 0.24
CDH13P55290 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CDH13P55290 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.57■□□□□ 0.24
CDH13P55290 AC093458.2-201ENST00000623150 629 ntBASIC16.57■□□□□ 0.24
CDH13P55290 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms