Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB3P54753 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB3P54753 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.6■□□□□ 0.41
EPHB3P54753 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB3P54753 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
EPHB3P54753 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
EPHB3P54753 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.6■□□□□ 0.41
EPHB3P54753 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
EPHB3P54753 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 TUBB8P12-201ENST00000308911 1335 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 TUBB3P1-201ENST00000405796 1332 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 TUBB7P-202ENST00000428444 1305 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 TUBB8P7-204ENST00000567960 1332 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
EPHB3P54753 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EPHB3P54753 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.59■□□□□ 0.41
EPHB3P54753 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 GPS2P2-201ENST00000430745 888 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 AC084121.4-201ENST00000641598 221 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 AF228730.8-201ENST00000642140 221 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 AC007613.1-201ENST00000572811 2597 ntBASIC17.59■□□□□ 0.41
EPHB3P54753 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
EPHB3P54753 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.59■□□□□ 0.41
EPHB3P54753 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
EPHB3P54753 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
EPHB3P54753 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.58■□□□□ 0.41
EPHB3P54753 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.58■□□□□ 0.41
EPHB3P54753 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.58■□□□□ 0.41
EPHB3P54753 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
EPHB3P54753 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EPHB3P54753 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB3P54753 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB3P54753 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
EPHB3P54753 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB3P54753 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB3P54753 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.58■□□□□ 0.4
EPHB3P54753 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.58■□□□□ 0.4
EPHB3P54753 AL096865.1-201ENST00000606796 927 ntBASIC17.58■□□□□ 0.4
EPHB3P54753 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHB3P54753 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.58■□□□□ 0.4
EPHB3P54753 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
EPHB3P54753 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
EPHB3P54753 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
EPHB3P54753 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
EPHB3P54753 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
EPHB3P54753 AC108860.2-201ENST00000562760 2183 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 LINC00896-202ENST00000609602 2128 ntBASIC17.57■□□□□ 0.4
EPHB3P54753 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.57■□□□□ 0.4
EPHB3P54753 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
EPHB3P54753 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms