Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.61■□□□□ 0.57
CPT1AP50416 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.61■□□□□ 0.57
CPT1AP50416 TUBB8P12-201ENST00000308911 1335 ntBASIC18.61■□□□□ 0.57
CPT1AP50416 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.61■□□□□ 0.57
CPT1AP50416 TUBB7P-202ENST00000428444 1305 ntBASIC18.61■□□□□ 0.57
CPT1AP50416 TUBB8P7-204ENST00000567960 1332 ntBASIC18.61■□□□□ 0.57
CPT1AP50416 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.61■□□□□ 0.57
CPT1AP50416 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.61■□□□□ 0.57
CPT1AP50416 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.61■□□□□ 0.57
CPT1AP50416 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.61■□□□□ 0.57
CPT1AP50416 AC009118.2-201ENST00000613275 655 ntBASIC18.61■□□□□ 0.57
CPT1AP50416 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.61■□□□□ 0.57
CPT1AP50416 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CPT1AP50416 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CPT1AP50416 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPT1AP50416 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.6■□□□□ 0.57
CPT1AP50416 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.6■□□□□ 0.57
CPT1AP50416 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.6■□□□□ 0.57
CPT1AP50416 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.6■□□□□ 0.57
CPT1AP50416 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 HLA-H-201ENST00000383620 1096 ntBASIC18.6■□□□□ 0.57
CPT1AP50416 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.6■□□□□ 0.57
CPT1AP50416 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.6■□□□□ 0.57
CPT1AP50416 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.6■□□□□ 0.57
CPT1AP50416 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.6■□□□□ 0.57
CPT1AP50416 AC124947.2-201ENST00000547118 1133 ntBASIC18.6■□□□□ 0.57
CPT1AP50416 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CPT1AP50416 AC027307.3-201ENST00000594262 1100 ntBASIC18.6■□□□□ 0.57
CPT1AP50416 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.6■□□□□ 0.57
CPT1AP50416 AL590560.3-201ENST00000623350 461 ntBASIC18.6■□□□□ 0.57
CPT1AP50416 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CPT1AP50416 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.6■□□□□ 0.57
CPT1AP50416 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CPT1AP50416 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CPT1AP50416 NOC2LP1-202ENST00000452600 2235 ntBASIC18.59■□□□□ 0.57
CPT1AP50416 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.59■□□□□ 0.57
CPT1AP50416 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.59■□□□□ 0.57
CPT1AP50416 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CPT1AP50416 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPT1AP50416 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.59■□□□□ 0.57
CPT1AP50416 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.59■□□□□ 0.57
CPT1AP50416 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.59■□□□□ 0.57
CPT1AP50416 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.59■□□□□ 0.57
CPT1AP50416 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.59■□□□□ 0.57
CPT1AP50416 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.59■□□□□ 0.57
CPT1AP50416 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.59■□□□□ 0.57
CPT1AP50416 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.59■□□□□ 0.57
CPT1AP50416 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.59■□□□□ 0.57
CPT1AP50416 SPDYE12P-201ENST00000618416 771 ntBASIC18.59■□□□□ 0.57
CPT1AP50416 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.59■□□□□ 0.57
CPT1AP50416 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CPT1AP50416 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.59■□□□□ 0.57
CPT1AP50416 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 AC134043.2-201ENST00000624206 2238 ntBASIC18.59■□□□□ 0.57
CPT1AP50416 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CPT1AP50416 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CPT1AP50416 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPT1AP50416 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPT1AP50416 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CPT1AP50416 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
CPT1AP50416 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPT1AP50416 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPT1AP50416 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CPT1AP50416 AL035456.1-201ENST00000456064 1369 ntBASIC18.58■□□□□ 0.57
CPT1AP50416 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms