Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC19.78■□□□□ 0.76
MRE11P49959 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
MRE11P49959 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.78■□□□□ 0.76
MRE11P49959 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MRE11P49959 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
MRE11P49959 KRT18P23-201ENST00000435622 1283 ntBASIC19.77■□□□□ 0.76
MRE11P49959 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.77■□□□□ 0.76
MRE11P49959 EMBP1-201ENST00000458200 901 ntBASIC19.77■□□□□ 0.76
MRE11P49959 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 AC026271.3-201ENST00000571884 352 ntBASIC19.77■□□□□ 0.76
MRE11P49959 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.77■□□□□ 0.76
MRE11P49959 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
MRE11P49959 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC19.77■□□□□ 0.76
MRE11P49959 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
MRE11P49959 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.77■□□□□ 0.76
MRE11P49959 HLA-A-202ENST00000376806 1854 ntBASIC19.77■□□□□ 0.76
MRE11P49959 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
MRE11P49959 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MRE11P49959 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
MRE11P49959 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.76■□□□□ 0.75
MRE11P49959 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MRE11P49959 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
MRE11P49959 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC19.76■□□□□ 0.75
MRE11P49959 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.76■□□□□ 0.75
MRE11P49959 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.76■□□□□ 0.75
MRE11P49959 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.76■□□□□ 0.75
MRE11P49959 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.76■□□□□ 0.75
MRE11P49959 KRT18P38-201ENST00000449496 1282 ntBASIC19.76■□□□□ 0.75
MRE11P49959 B3GAT3P1-201ENST00000471720 806 ntBASIC19.76■□□□□ 0.75
MRE11P49959 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 AC092865.5-201ENST00000545435 363 ntBASIC19.76■□□□□ 0.75
MRE11P49959 IFNL4P1-201ENST00000607083 540 ntBASIC19.76■□□□□ 0.75
MRE11P49959 AC120114.3-201ENST00000611923 658 ntBASIC19.76■□□□□ 0.75
MRE11P49959 AC011298.2-201ENST00000617989 482 ntBASIC19.76■□□□□ 0.75
MRE11P49959 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
MRE11P49959 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
MRE11P49959 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
MRE11P49959 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
MRE11P49959 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MRE11P49959 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.75■□□□□ 0.75
MRE11P49959 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
MRE11P49959 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms