Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC10.79□□□□□ -0.68
UBE2AP49459 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC10.79□□□□□ -0.68
UBE2AP49459 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
UBE2AP49459 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 NKILA-202ENST00000614771 2598 ntBASIC10.78□□□□□ -0.68
UBE2AP49459 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
UBE2AP49459 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2AP49459 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2AP49459 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 AC096582.2-201ENST00000510860 516 ntBASIC10.78□□□□□ -0.68
UBE2AP49459 STK19B-204ENST00000512515 211 ntBASIC10.78□□□□□ -0.68
UBE2AP49459 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2AP49459 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC10.78□□□□□ -0.68
UBE2AP49459 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC10.78□□□□□ -0.68
UBE2AP49459 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
UBE2AP49459 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.78□□□□□ -0.68
UBE2AP49459 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
UBE2AP49459 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2AP49459 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2AP49459 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2AP49459 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2AP49459 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.77□□□□□ -0.68
UBE2AP49459 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC10.77□□□□□ -0.68
UBE2AP49459 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2AP49459 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
UBE2AP49459 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC10.77□□□□□ -0.68
UBE2AP49459 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
UBE2AP49459 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UBE2AP49459 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2AP49459 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
UBE2AP49459 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
UBE2AP49459 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC10.77□□□□□ -0.69
UBE2AP49459 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
UBE2AP49459 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
UBE2AP49459 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms